Course Description
| Course | Code | Semester | T+P (Hour) | Credit | ECTS |
|---|---|---|---|---|---|
| CELL BIOLOGY and BIOCHEMISTRY | - | Fall Semester | 4+0 | 4 | 9 |
| Course Program |
| Prerequisites Courses | |
| Recommended Elective Courses |
| Language of Course | Turkish |
| Course Level | Second Cycle (Master's Degree) |
| Course Type | Elective |
| Course Coordinator | Assist.Prof. Esra Nur YİĞİT |
| Name of Lecturer(s) | Prof.Dr. Gürkan ÖZTÜRK, Prof.Dr. Türkan YİĞİTBAŞI, Prof.Dr. Esra ÇAĞAVİ, Assoc.Prof. Sultan Sibel ERDEM, Prof.Dr. Süleyman YILDIRIM, Assist.Prof. Salih GENCER, Assist.Prof. Neşe AYŞİT, Assist.Prof. Berrak ÇAĞLAYAN |
| Assistant(s) | |
| Aim | The aim of this course is to examine biochemical reactions occurring within the cell and the molecules used in these reactions, providing information about the structure and functioning of prokaryotic and eukaryotic cells. |
| Course Content | This course contains; Carbohydrates,Lipids,Proteins,Energy Metabolism,Hormones,Vitamins and minerals,Endomembrane System and Organels 1,Endomembrane System and Organels 2,Cytoskeleton and Extracellular environment,Signal transduction mechanisms,Cell Nucleus and DNA,Protein Synthesis,Prokaryotic Cell,Microbial reproduction and metabolism. |
| Dersin Öğrenme Kazanımları | Teaching Methods | Assessment Methods |
| Lists the structures and functions of carbohydrates, fats, and proteins. | 10, 16, 9 | E |
| Describes the principles of energy metabolism in eukaryotic cells. | 10, 16, 9 | E |
| Associates the roles of basic biomolecules in cell metabolism with energy production processes. | 10, 16, 9 | E |
| Defines the production, functions, and roles of hormones in signal transduction processes. | 10, 16, 9 | E |
| Evaluates the biochemical functions of vitamins and minerals and their effects on cellular health. | 10, 16, 9 | E |
| Describes the roles of phospholipids, cholesterol, and glycolipids in the cell membrane. | 10, 16, 9 | A |
| Distinguishes membranous structures and organelles within the cell. | 10, 16, 9 | A |
| Establishes cause-and-effect relationships between interactions of organelles within the cell. | 10, 16, 9 | A |
| Associates cytoskeleton elements and motor proteins with their functions. | 10, 16, 9 | A |
| Interprets the effects of changes occurring in the extracellular environment on the intracellular environment. | 10, 16, 9 | A |
| Describes the types of receptors present in the cell membrane and their activation processes. | 10, 16, 9 | A |
| Explains the molecular principles of intercellular and intracellular signal transduction. | 10, 16, 9 | A |
| Analyzes the processes of DNA replication, transcription, and translation. | 10, 16, 9 | A |
| Compares the structure and characteristics of prokaryotic cells with eukaryotic cells. | 10, 16, 9 | A |
| Defines the fundamental characteristics of microbial metabolism. | 10, 16, 9 | A |
| Teaching Methods: | 10: Discussion Method, 16: Question - Answer Technique, 9: Lecture Method |
| Assessment Methods: | A: Traditional Written Exam, E: Homework |
Course Outline
| Order | Subjects | Preliminary Work |
|---|---|---|
| 1 | Carbohydrates | Alberts, B., Johnson, A., Lewis, J., Raff, M., Roberts, K., & Walter, P., Molecular Biology of the Cell, Chapter 2: Cell Chemistry and Bioenergetics |
| 2 | Lipids | Alberts, B., Johnson, A., Lewis, J., Raff, M., Roberts, K., & Walter, P., Molecular Biology of the Cell, Chapter 2: Cell Chemistry and Bioenergetics |
| 3 | Proteins | Alberts, B., Johnson, A., Lewis, J., Raff, M., Roberts, K., & Walter, P., Molecular Biology of the Cell, Chapter 2: Cell Chemistry and Bioenergetics |
| 4 | Energy Metabolism | Alberts, B., Johnson, A., Lewis, J., Raff, M., Roberts, K., & Walter, P., Molecular Biology of the Cell, Chapter 2: Cell Chemistry and Bioenergetics |
| 5 | Hormones | John E. Hall - Guyton and Hall Textbook of Medical Physiology, Chapter 74: Introduction to Endocrinology |
| 6 | Vitamins and minerals | John E. Hall - Guyton and Hall Textbook of Medical Physiology, Chapter 72: Dietary Balances; Regulation of Feeding; Obesity and Starvation; Vitamins and Minerals |
| 7 | Endomembrane System and Organels 1 | Alberts, B., Johnson, A., Lewis, J., Raff, M., Roberts, K., & Walter, P., Molecular Biology of the Cell, Chapter 10: Membrane Structure |
| 8 | Endomembrane System and Organels 2 | Alberts, B., Johnson, A., Lewis, J., Raff, M., Roberts, K., & Walter, P., Molecular Biology of the Cell, Chapter 11: Intracellular Compartments and Protein Sorting |
| 9 | Cytoskeleton and Extracellular environment | Alberts, B., Johnson, A., Lewis, J., Raff, M., Roberts, K., & Walter, P., Molecular Biology of the Cell, Chapter 16: The Cytoskeleton |
| 10 | Signal transduction mechanisms | Alberts, B., Johnson, A., Lewis, J., Raff, M., Roberts, K., & Walter, P., Molecular Biology of the Cell, Chapter 15: Cell Signalling |
| 11 | Cell Nucleus and DNA | Alberts, B., Johnson, A., Lewis, J., Raff, M., Roberts, K., & Walter, P., Molecular Biology of the Cell, Chapter 6: How Cells Read the Genome:From DNA to Protein |
| 12 | Protein Synthesis | Alberts, B., Johnson, A., Lewis, J., Raff, M., Roberts, K., & Walter, P., Molecular Biology of the Cell, Chapter 6: How Cells Read the Genome:From DNA to Protein |
| 13 | Prokaryotic Cell | Willey J., Sandman K., Wood D., Prescott Microbiology, Part II: Microbial Nutrition Growth and Control |
| 14 | Microbial reproduction and metabolism | Willey J., Sandman K., Wood D., Prescott Microbiology, Part II: Microbial Nutrition Growth and Control , Part III: Microbial Metabolism |
| Resources |
| Alberts, B., Johnson, A., Lewis, J., Raff, M., Roberts, K., & Walter, P., Molecular Biology of the Cell Willey J., Sandman K., Wood D., Prescott Microbiology Nelson D., Cox M. Lehninger Principles of Biochemistry Nesrin Emekli, Temel ve Uygulamalı Biyokimya |
| Lecture notes and lecturer's presentations |
Course Contribution to Program Qualifications
| Course Contribution to Program Qualifications | |||||||
| No | Program Qualification | Contribution Level | |||||
| 1 | 2 | 3 | 4 | 5 | |||
| 1 | The students will be able to recognize the tissues, organs and systems in the human body. | ||||||
| 2 | - Know the basic functions of organs and systems and their basic functional aspects. | X | |||||
| 3 | - Know the localization, surface projection and course of the bones, muscles, vessels, nerves and organs. | ||||||
| 4 | - Identify organs and other structures on a cadaver. | ||||||
| 5 | - Identify normal anatomic structures from radiogram, MR and CT images. | ||||||
| 6 | - Have a general knowledge about basic diseases of the organs and systems. | ||||||
| 7 | - Evaluate certain clinical problems that can be explained on the basis of anatomical knowledge. | ||||||
| 8 | - Grasp the relation between the anatomy discipline and other basic medical and clinical disciplines | X | |||||
| 9 | Able to prepare questions for scientific research, develop hypothesis and methods. | ||||||
| 10 | Able to know how to dissect different parts of a cadaver. | ||||||
| 11 | Able to present on the topics of their branch and the scientific data they assessed | ||||||
| 12 | Able to design research and develop it into a project and present it. Able to issue the interim and final report keeping track of the project | ||||||
| 13 | Can turn scientific research results into articles. | ||||||
| 14 | Develop their own way of learning, practicing lifelong learning in their field of study. | ||||||
| 15 | Able to follow international publications in their own field using at least one foreign language effectively. | ||||||
| 16 | Able to make use of computers and the internet to access knowledge effectively. | ||||||
| 17 | Able to form trust based relationships with students. | ||||||
| 18 | Able to exchange views on related field of study and scientific research topics with others. | ||||||
| 19 | Work in a team responsibility. | ||||||
| 20 | Able to use Scientific databases effectively. | ||||||
| 21 | Able to read, analyze and evaluate scientific data critically. | X | |||||
| 22 | Able to develop questions for the scientific research, hypothesis and methodology. | ||||||
| 23 | Able to present, share and discuss research data effectively. | ||||||
Assessment Methods
| Contribution Level | Absolute Evaluation | |
| Rate of Midterm Exam to Success | 50 | |
| Rate of Final Exam to Success | 50 | |
| Total | 100 | |
| ECTS / Workload Table | ||||||
| Activities | Number of | Duration(Hour) | Total Workload(Hour) | |||
| Course Hours | 14 | 4 | 56 | |||
| Guided Problem Solving | 14 | 8 | 112 | |||
| Resolution of Homework Problems and Submission as a Report | 2 | 10 | 20 | |||
| Term Project | 1 | 5 | 5 | |||
| Presentation of Project / Seminar | 1 | 5 | 5 | |||
| Quiz | 0 | 0 | 0 | |||
| Midterm Exam | 1 | 30 | 30 | |||
| General Exam | 1 | 36 | 36 | |||
| Performance Task, Maintenance Plan | 0 | 0 | 0 | |||
| Total Workload(Hour) | 264 | |||||
| Dersin AKTS Kredisi = Toplam İş Yükü (Saat)/30*=(264/30) | 9 | |||||
| ECTS of the course: 30 hours of work is counted as 1 ECTS credit. | ||||||
Detail Informations of the Course
Course Description
| Course | Code | Semester | T+P (Hour) | Credit | ECTS |
|---|---|---|---|---|---|
| CELL BIOLOGY and BIOCHEMISTRY | - | Fall Semester | 4+0 | 4 | 9 |
| Course Program |
| Prerequisites Courses | |
| Recommended Elective Courses |
| Language of Course | Turkish |
| Course Level | Second Cycle (Master's Degree) |
| Course Type | Elective |
| Course Coordinator | Assist.Prof. Esra Nur YİĞİT |
| Name of Lecturer(s) | Prof.Dr. Gürkan ÖZTÜRK, Prof.Dr. Türkan YİĞİTBAŞI, Prof.Dr. Esra ÇAĞAVİ, Assoc.Prof. Sultan Sibel ERDEM, Prof.Dr. Süleyman YILDIRIM, Assist.Prof. Salih GENCER, Assist.Prof. Neşe AYŞİT, Assist.Prof. Berrak ÇAĞLAYAN |
| Assistant(s) | |
| Aim | The aim of this course is to examine biochemical reactions occurring within the cell and the molecules used in these reactions, providing information about the structure and functioning of prokaryotic and eukaryotic cells. |
| Course Content | This course contains; Carbohydrates,Lipids,Proteins,Energy Metabolism,Hormones,Vitamins and minerals,Endomembrane System and Organels 1,Endomembrane System and Organels 2,Cytoskeleton and Extracellular environment,Signal transduction mechanisms,Cell Nucleus and DNA,Protein Synthesis,Prokaryotic Cell,Microbial reproduction and metabolism. |
| Dersin Öğrenme Kazanımları | Teaching Methods | Assessment Methods |
| Lists the structures and functions of carbohydrates, fats, and proteins. | 10, 16, 9 | E |
| Describes the principles of energy metabolism in eukaryotic cells. | 10, 16, 9 | E |
| Associates the roles of basic biomolecules in cell metabolism with energy production processes. | 10, 16, 9 | E |
| Defines the production, functions, and roles of hormones in signal transduction processes. | 10, 16, 9 | E |
| Evaluates the biochemical functions of vitamins and minerals and their effects on cellular health. | 10, 16, 9 | E |
| Describes the roles of phospholipids, cholesterol, and glycolipids in the cell membrane. | 10, 16, 9 | A |
| Distinguishes membranous structures and organelles within the cell. | 10, 16, 9 | A |
| Establishes cause-and-effect relationships between interactions of organelles within the cell. | 10, 16, 9 | A |
| Associates cytoskeleton elements and motor proteins with their functions. | 10, 16, 9 | A |
| Interprets the effects of changes occurring in the extracellular environment on the intracellular environment. | 10, 16, 9 | A |
| Describes the types of receptors present in the cell membrane and their activation processes. | 10, 16, 9 | A |
| Explains the molecular principles of intercellular and intracellular signal transduction. | 10, 16, 9 | A |
| Analyzes the processes of DNA replication, transcription, and translation. | 10, 16, 9 | A |
| Compares the structure and characteristics of prokaryotic cells with eukaryotic cells. | 10, 16, 9 | A |
| Defines the fundamental characteristics of microbial metabolism. | 10, 16, 9 | A |
| Teaching Methods: | 10: Discussion Method, 16: Question - Answer Technique, 9: Lecture Method |
| Assessment Methods: | A: Traditional Written Exam, E: Homework |
Course Outline
| Order | Subjects | Preliminary Work |
|---|---|---|
| 1 | Carbohydrates | Alberts, B., Johnson, A., Lewis, J., Raff, M., Roberts, K., & Walter, P., Molecular Biology of the Cell, Chapter 2: Cell Chemistry and Bioenergetics |
| 2 | Lipids | Alberts, B., Johnson, A., Lewis, J., Raff, M., Roberts, K., & Walter, P., Molecular Biology of the Cell, Chapter 2: Cell Chemistry and Bioenergetics |
| 3 | Proteins | Alberts, B., Johnson, A., Lewis, J., Raff, M., Roberts, K., & Walter, P., Molecular Biology of the Cell, Chapter 2: Cell Chemistry and Bioenergetics |
| 4 | Energy Metabolism | Alberts, B., Johnson, A., Lewis, J., Raff, M., Roberts, K., & Walter, P., Molecular Biology of the Cell, Chapter 2: Cell Chemistry and Bioenergetics |
| 5 | Hormones | John E. Hall - Guyton and Hall Textbook of Medical Physiology, Chapter 74: Introduction to Endocrinology |
| 6 | Vitamins and minerals | John E. Hall - Guyton and Hall Textbook of Medical Physiology, Chapter 72: Dietary Balances; Regulation of Feeding; Obesity and Starvation; Vitamins and Minerals |
| 7 | Endomembrane System and Organels 1 | Alberts, B., Johnson, A., Lewis, J., Raff, M., Roberts, K., & Walter, P., Molecular Biology of the Cell, Chapter 10: Membrane Structure |
| 8 | Endomembrane System and Organels 2 | Alberts, B., Johnson, A., Lewis, J., Raff, M., Roberts, K., & Walter, P., Molecular Biology of the Cell, Chapter 11: Intracellular Compartments and Protein Sorting |
| 9 | Cytoskeleton and Extracellular environment | Alberts, B., Johnson, A., Lewis, J., Raff, M., Roberts, K., & Walter, P., Molecular Biology of the Cell, Chapter 16: The Cytoskeleton |
| 10 | Signal transduction mechanisms | Alberts, B., Johnson, A., Lewis, J., Raff, M., Roberts, K., & Walter, P., Molecular Biology of the Cell, Chapter 15: Cell Signalling |
| 11 | Cell Nucleus and DNA | Alberts, B., Johnson, A., Lewis, J., Raff, M., Roberts, K., & Walter, P., Molecular Biology of the Cell, Chapter 6: How Cells Read the Genome:From DNA to Protein |
| 12 | Protein Synthesis | Alberts, B., Johnson, A., Lewis, J., Raff, M., Roberts, K., & Walter, P., Molecular Biology of the Cell, Chapter 6: How Cells Read the Genome:From DNA to Protein |
| 13 | Prokaryotic Cell | Willey J., Sandman K., Wood D., Prescott Microbiology, Part II: Microbial Nutrition Growth and Control |
| 14 | Microbial reproduction and metabolism | Willey J., Sandman K., Wood D., Prescott Microbiology, Part II: Microbial Nutrition Growth and Control , Part III: Microbial Metabolism |
| Resources |
| Alberts, B., Johnson, A., Lewis, J., Raff, M., Roberts, K., & Walter, P., Molecular Biology of the Cell Willey J., Sandman K., Wood D., Prescott Microbiology Nelson D., Cox M. Lehninger Principles of Biochemistry Nesrin Emekli, Temel ve Uygulamalı Biyokimya |
| Lecture notes and lecturer's presentations |
Course Contribution to Program Qualifications
| Course Contribution to Program Qualifications | |||||||
| No | Program Qualification | Contribution Level | |||||
| 1 | 2 | 3 | 4 | 5 | |||
| 1 | The students will be able to recognize the tissues, organs and systems in the human body. | ||||||
| 2 | - Know the basic functions of organs and systems and their basic functional aspects. | X | |||||
| 3 | - Know the localization, surface projection and course of the bones, muscles, vessels, nerves and organs. | ||||||
| 4 | - Identify organs and other structures on a cadaver. | ||||||
| 5 | - Identify normal anatomic structures from radiogram, MR and CT images. | ||||||
| 6 | - Have a general knowledge about basic diseases of the organs and systems. | ||||||
| 7 | - Evaluate certain clinical problems that can be explained on the basis of anatomical knowledge. | ||||||
| 8 | - Grasp the relation between the anatomy discipline and other basic medical and clinical disciplines | X | |||||
| 9 | Able to prepare questions for scientific research, develop hypothesis and methods. | ||||||
| 10 | Able to know how to dissect different parts of a cadaver. | ||||||
| 11 | Able to present on the topics of their branch and the scientific data they assessed | ||||||
| 12 | Able to design research and develop it into a project and present it. Able to issue the interim and final report keeping track of the project | ||||||
| 13 | Can turn scientific research results into articles. | ||||||
| 14 | Develop their own way of learning, practicing lifelong learning in their field of study. | ||||||
| 15 | Able to follow international publications in their own field using at least one foreign language effectively. | ||||||
| 16 | Able to make use of computers and the internet to access knowledge effectively. | ||||||
| 17 | Able to form trust based relationships with students. | ||||||
| 18 | Able to exchange views on related field of study and scientific research topics with others. | ||||||
| 19 | Work in a team responsibility. | ||||||
| 20 | Able to use Scientific databases effectively. | ||||||
| 21 | Able to read, analyze and evaluate scientific data critically. | X | |||||
| 22 | Able to develop questions for the scientific research, hypothesis and methodology. | ||||||
| 23 | Able to present, share and discuss research data effectively. | ||||||
Assessment Methods
| Contribution Level | Absolute Evaluation | |
| Rate of Midterm Exam to Success | 50 | |
| Rate of Final Exam to Success | 50 | |
| Total | 100 | |