Course Description
| Course | Code | Semester | T+P (Hour) | Credit | ECTS |
|---|---|---|---|---|---|
| LABORATORY ROTATION II | - | Spring Semester | 0+0 | - | 6 |
| Course Program |
| Prerequisites Courses | |
| Recommended Elective Courses |
| Language of Course | Turkish |
| Course Level | Second Cycle (Master's Degree) |
| Course Type | Elective |
| Course Coordinator | Prof.Dr. Esra ÇAĞAVİ |
| Name of Lecturer(s) | Prof.Dr. Lütfü HANOĞLU, Prof.Dr. Gürkan ÖZTÜRK, Prof.Dr. Esra ÇAĞAVİ |
| Assistant(s) | Course Supervisor: Prof. Dr Esra Çağavi, Course LaboAssistants: Laboratory supervisor from Research Institute for Health Sciences and Technologies (SABITA), |
| Aim | The aim of the Laboratory Rotation-II course is for Master’s level students to observe and be able to explain the basic technical approaches in laboratory application that will benefit their thesis work and understanding of the scope of different laboratory disciplines. By rotating in different labs every week, students are aimed to be exposed to the basic molecular biology techniques, proteomics and genomics applications, FACS, primary and cell line culture applications, transgenic animal models, electrophysiology, neuroscience and cancer research applications, basic protein and gene expression analysis. |
| Course Content | This course contains; Electroencephalography (EEG) and its use in scientific research,Electroencephalography (EEG) application and practice,Flourescence activated cell sorting (FACS) method,Functional Neurology Applications,Primary cells and cell line culture applications,Experimental and transgenic animal models and applications ,Evaluation of Laboratory Notebooks for the Midterm Exam,Drug screening and cell survival tests,Electrophysiology and patch-clamp method,Gene expression Analysis in Molecular Biology,Cancer Biology Lab and Applicaitons,Histology and cryosectioning technique,Protein Analysis in Molecular Biology,Evaluation of Laboratory Notebooks for the Final Exam. |
| Dersin Öğrenme Kazanımları | Teaching Methods | Assessment Methods |
| Explains the culture methods for differen cell type, experimental transgenic animal models, basic neuroscience application as EEG and electrophsiology, basic approaches in cancer, cell survival analysis, FACS and tissue sectioning practices. | 14, 17, 3, 9 | A, E |
| Explain principles of different experimental techniques. | 14, 17, 9 | A, E |
| Define the principles of basic research laboratory equipments. | 14, 17, 9 | A, E |
| Explains how to process and interpret scientific data at the basic level. | 14, 17, 9 | A, E |
| Teaching Methods: | 14: Self Study Method, 17: Experimental Technique, 3: Problem Baded Learning Model, 9: Lecture Method |
| Assessment Methods: | A: Traditional Written Exam, E: Homework |
Course Outline
| Order | Subjects | Preliminary Work |
|---|---|---|
| 1 | Electroencephalography (EEG) and its use in scientific research | Self-study |
| 2 | Electroencephalography (EEG) application and practice | Self-study |
| 3 | Flourescence activated cell sorting (FACS) method | Self-study |
| 4 | Functional Neurology Applications | Self-study |
| 5 | Primary cells and cell line culture applications | Self-study |
| 6 | Experimental and transgenic animal models and applications | |
| 7 | Evaluation of Laboratory Notebooks for the Midterm Exam | |
| 8 | Drug screening and cell survival tests | |
| 9 | Electrophysiology and patch-clamp method | |
| 10 | Gene expression Analysis in Molecular Biology | |
| 11 | Cancer Biology Lab and Applicaitons | |
| 12 | Histology and cryosectioning technique | |
| 13 | Protein Analysis in Molecular Biology | |
| 14 | Evaluation of Laboratory Notebooks for the Final Exam |
| Resources |
| 1. Laboratory Biosafety Manual (Third edition) 1.Containment of biohazards - methods 2. Manuals I.Title. ISBN 92 4 154650 6 (LC/NLM classification: QY 25) WHO/CDS/CSR/LYO/2004.11 |
| Internet database |
Course Contribution to Program Qualifications
| Course Contribution to Program Qualifications | |||||||
| No | Program Qualification | Contribution Level | |||||
| 1 | 2 | 3 | 4 | 5 | |||
| 1 | The students will be able to recognize the tissues, organs and systems in the human body. | X | |||||
| 2 | - Know the basic functions of organs and systems and their basic functional aspects. | ||||||
| 3 | - Know the localization, surface projection and course of the bones, muscles, vessels, nerves and organs. | ||||||
| 4 | - Identify organs and other structures on a cadaver. | ||||||
| 5 | - Identify normal anatomic structures from radiogram, MR and CT images. | ||||||
| 6 | - Have a general knowledge about basic diseases of the organs and systems. | ||||||
| 7 | - Evaluate certain clinical problems that can be explained on the basis of anatomical knowledge. | X | |||||
| 8 | - Grasp the relation between the anatomy discipline and other basic medical and clinical disciplines | X | |||||
| 9 | Able to prepare questions for scientific research, develop hypothesis and methods. | X | |||||
| 10 | Able to know how to dissect different parts of a cadaver. | ||||||
| 11 | Able to present on the topics of their branch and the scientific data they assessed | X | |||||
| 12 | Able to design research and develop it into a project and present it. Able to issue the interim and final report keeping track of the project | X | |||||
| 13 | Can turn scientific research results into articles. | X | |||||
| 14 | Develop their own way of learning, practicing lifelong learning in their field of study. | X | |||||
| 15 | Able to follow international publications in their own field using at least one foreign language effectively. | ||||||
| 16 | Able to make use of computers and the internet to access knowledge effectively. | X | |||||
| 17 | Able to form trust based relationships with students. | ||||||
| 18 | Able to exchange views on related field of study and scientific research topics with others. | X | |||||
| 19 | Work in a team responsibility. | ||||||
| 20 | Able to use Scientific databases effectively. | X | |||||
| 21 | Able to read, analyze and evaluate scientific data critically. | X | |||||
| 22 | Able to develop questions for the scientific research, hypothesis and methodology. | X | |||||
| 23 | Able to present, share and discuss research data effectively. | X | |||||
Assessment Methods
| Contribution Level | Absolute Evaluation | |
| Rate of Midterm Exam to Success | 50 | |
| Rate of Final Exam to Success | 50 | |
| Total | 100 | |
| ECTS / Workload Table | ||||||
| Activities | Number of | Duration(Hour) | Total Workload(Hour) | |||
| Course Hours | 14 | 3 | 42 | |||
| Guided Problem Solving | 6 | 3 | 18 | |||
| Resolution of Homework Problems and Submission as a Report | 14 | 5 | 70 | |||
| Term Project | 0 | 0 | 0 | |||
| Presentation of Project / Seminar | 0 | 0 | 0 | |||
| Quiz | 0 | 0 | 0 | |||
| Midterm Exam | 1 | 20 | 20 | |||
| General Exam | 1 | 20 | 20 | |||
| Performance Task, Maintenance Plan | 0 | 0 | 0 | |||
| Total Workload(Hour) | 170 | |||||
| Dersin AKTS Kredisi = Toplam İş Yükü (Saat)/30*=(170/30) | 6 | |||||
| ECTS of the course: 30 hours of work is counted as 1 ECTS credit. | ||||||
Detail Informations of the Course
Course Description
| Course | Code | Semester | T+P (Hour) | Credit | ECTS |
|---|---|---|---|---|---|
| LABORATORY ROTATION II | - | Spring Semester | 0+0 | - | 6 |
| Course Program |
| Prerequisites Courses | |
| Recommended Elective Courses |
| Language of Course | Turkish |
| Course Level | Second Cycle (Master's Degree) |
| Course Type | Elective |
| Course Coordinator | Prof.Dr. Esra ÇAĞAVİ |
| Name of Lecturer(s) | Prof.Dr. Lütfü HANOĞLU, Prof.Dr. Gürkan ÖZTÜRK, Prof.Dr. Esra ÇAĞAVİ |
| Assistant(s) | Course Supervisor: Prof. Dr Esra Çağavi, Course LaboAssistants: Laboratory supervisor from Research Institute for Health Sciences and Technologies (SABITA), |
| Aim | The aim of the Laboratory Rotation-II course is for Master’s level students to observe and be able to explain the basic technical approaches in laboratory application that will benefit their thesis work and understanding of the scope of different laboratory disciplines. By rotating in different labs every week, students are aimed to be exposed to the basic molecular biology techniques, proteomics and genomics applications, FACS, primary and cell line culture applications, transgenic animal models, electrophysiology, neuroscience and cancer research applications, basic protein and gene expression analysis. |
| Course Content | This course contains; Electroencephalography (EEG) and its use in scientific research,Electroencephalography (EEG) application and practice,Flourescence activated cell sorting (FACS) method,Functional Neurology Applications,Primary cells and cell line culture applications,Experimental and transgenic animal models and applications ,Evaluation of Laboratory Notebooks for the Midterm Exam,Drug screening and cell survival tests,Electrophysiology and patch-clamp method,Gene expression Analysis in Molecular Biology,Cancer Biology Lab and Applicaitons,Histology and cryosectioning technique,Protein Analysis in Molecular Biology,Evaluation of Laboratory Notebooks for the Final Exam. |
| Dersin Öğrenme Kazanımları | Teaching Methods | Assessment Methods |
| Explains the culture methods for differen cell type, experimental transgenic animal models, basic neuroscience application as EEG and electrophsiology, basic approaches in cancer, cell survival analysis, FACS and tissue sectioning practices. | 14, 17, 3, 9 | A, E |
| Explain principles of different experimental techniques. | 14, 17, 9 | A, E |
| Define the principles of basic research laboratory equipments. | 14, 17, 9 | A, E |
| Explains how to process and interpret scientific data at the basic level. | 14, 17, 9 | A, E |
| Teaching Methods: | 14: Self Study Method, 17: Experimental Technique, 3: Problem Baded Learning Model, 9: Lecture Method |
| Assessment Methods: | A: Traditional Written Exam, E: Homework |
Course Outline
| Order | Subjects | Preliminary Work |
|---|---|---|
| 1 | Electroencephalography (EEG) and its use in scientific research | Self-study |
| 2 | Electroencephalography (EEG) application and practice | Self-study |
| 3 | Flourescence activated cell sorting (FACS) method | Self-study |
| 4 | Functional Neurology Applications | Self-study |
| 5 | Primary cells and cell line culture applications | Self-study |
| 6 | Experimental and transgenic animal models and applications | |
| 7 | Evaluation of Laboratory Notebooks for the Midterm Exam | |
| 8 | Drug screening and cell survival tests | |
| 9 | Electrophysiology and patch-clamp method | |
| 10 | Gene expression Analysis in Molecular Biology | |
| 11 | Cancer Biology Lab and Applicaitons | |
| 12 | Histology and cryosectioning technique | |
| 13 | Protein Analysis in Molecular Biology | |
| 14 | Evaluation of Laboratory Notebooks for the Final Exam |
| Resources |
| 1. Laboratory Biosafety Manual (Third edition) 1.Containment of biohazards - methods 2. Manuals I.Title. ISBN 92 4 154650 6 (LC/NLM classification: QY 25) WHO/CDS/CSR/LYO/2004.11 |
| Internet database |
Course Contribution to Program Qualifications
| Course Contribution to Program Qualifications | |||||||
| No | Program Qualification | Contribution Level | |||||
| 1 | 2 | 3 | 4 | 5 | |||
| 1 | The students will be able to recognize the tissues, organs and systems in the human body. | X | |||||
| 2 | - Know the basic functions of organs and systems and their basic functional aspects. | ||||||
| 3 | - Know the localization, surface projection and course of the bones, muscles, vessels, nerves and organs. | ||||||
| 4 | - Identify organs and other structures on a cadaver. | ||||||
| 5 | - Identify normal anatomic structures from radiogram, MR and CT images. | ||||||
| 6 | - Have a general knowledge about basic diseases of the organs and systems. | ||||||
| 7 | - Evaluate certain clinical problems that can be explained on the basis of anatomical knowledge. | X | |||||
| 8 | - Grasp the relation between the anatomy discipline and other basic medical and clinical disciplines | X | |||||
| 9 | Able to prepare questions for scientific research, develop hypothesis and methods. | X | |||||
| 10 | Able to know how to dissect different parts of a cadaver. | ||||||
| 11 | Able to present on the topics of their branch and the scientific data they assessed | X | |||||
| 12 | Able to design research and develop it into a project and present it. Able to issue the interim and final report keeping track of the project | X | |||||
| 13 | Can turn scientific research results into articles. | X | |||||
| 14 | Develop their own way of learning, practicing lifelong learning in their field of study. | X | |||||
| 15 | Able to follow international publications in their own field using at least one foreign language effectively. | ||||||
| 16 | Able to make use of computers and the internet to access knowledge effectively. | X | |||||
| 17 | Able to form trust based relationships with students. | ||||||
| 18 | Able to exchange views on related field of study and scientific research topics with others. | X | |||||
| 19 | Work in a team responsibility. | ||||||
| 20 | Able to use Scientific databases effectively. | X | |||||
| 21 | Able to read, analyze and evaluate scientific data critically. | X | |||||
| 22 | Able to develop questions for the scientific research, hypothesis and methodology. | X | |||||
| 23 | Able to present, share and discuss research data effectively. | X | |||||
Assessment Methods
| Contribution Level | Absolute Evaluation | |
| Rate of Midterm Exam to Success | 50 | |
| Rate of Final Exam to Success | 50 | |
| Total | 100 | |