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Course Description

CourseCodeSemesterT+P (Hour)CreditECTS
LABORATORY ROTATION II-Fall Semester0+0-6
Course Program
Prerequisites Courses
Recommended Elective Courses
Language of CourseTurkish
Course LevelSecond Cycle (Master's Degree)
Course TypeElective
Course CoordinatorProf.Dr. Esra ÇAĞAVİ
Name of Lecturer(s)Prof.Dr. Lütfü HANOĞLU, Prof.Dr. Gürkan ÖZTÜRK, Prof.Dr. Esra ÇAĞAVİ
Assistant(s)Course Supervisor: Prof. Dr Esra Çağavi, Course LaboAssistants: Laboratory supervisor from Research Institute for Health Sciences and Technologies (SABITA),
AimThe aim of the Laboratory Rotation-II course is for Master’s level students to observe and be able to explain the basic technical approaches in laboratory application that will benefit their thesis work and understanding of the scope of different laboratory disciplines. By rotating in different labs every week, students are aimed to be exposed to the basic molecular biology techniques, proteomics and genomics applications, FACS, primary and cell line culture applications, transgenic animal models, electrophysiology, neuroscience and cancer research applications, basic protein and gene expression analysis.
Course ContentThis course contains; Electroencephalography (EEG) and its use in scientific research,Electroencephalography (EEG) application and practice,Flourescence activated cell sorting (FACS) method,Functional Neurology Applications,Primary cells and cell line culture applications,Experimental and transgenic animal models and applications
,Evaluation of Laboratory Notebooks for the Midterm Exam,Drug screening and cell survival tests,Electrophysiology and patch-clamp method,Gene expression Analysis in Molecular Biology,Cancer Biology Lab and Applicaitons,Histology and cryosectioning technique,Protein Analysis in Molecular Biology,Evaluation of Laboratory Notebooks for the Final Exam.
Dersin Öğrenme KazanımlarıTeaching MethodsAssessment Methods
Explains the culture methods for differen cell type, experimental transgenic animal models, basic neuroscience application as EEG and electrophsiology, basic approaches in cancer, cell survival analysis, FACS and tissue sectioning practices. 14, 17, 3, 9A, E
Explain principles of different experimental techniques.14, 17, 9A, E
Define the principles of basic research laboratory equipments.14, 17, 9A, E
Explains how to process and interpret scientific data at the basic level.14, 17, 9A, E
Teaching Methods:14: Self Study Method, 17: Experimental Technique, 3: Problem Baded Learning Model, 9: Lecture Method
Assessment Methods:A: Traditional Written Exam, E: Homework

Course Outline

OrderSubjectsPreliminary Work
1Electroencephalography (EEG) and its use in scientific researchSelf-study
2Electroencephalography (EEG) application and practiceSelf-study
3Flourescence activated cell sorting (FACS) methodSelf-study
4Functional Neurology ApplicationsSelf-study
5Primary cells and cell line culture applicationsSelf-study
6Experimental and transgenic animal models and applications
7Evaluation of Laboratory Notebooks for the Midterm Exam
8Drug screening and cell survival tests
9Electrophysiology and patch-clamp method
10Gene expression Analysis in Molecular Biology
11Cancer Biology Lab and Applicaitons
12Histology and cryosectioning technique
13Protein Analysis in Molecular Biology
14Evaluation of Laboratory Notebooks for the Final Exam
Resources
1. Laboratory Biosafety Manual (Third edition) 1.Containment of biohazards - methods 2. Manuals I.Title. ISBN 92 4 154650 6 (LC/NLM classification: QY 25) WHO/CDS/CSR/LYO/2004.11
Internet database

Course Contribution to Program Qualifications

Course Contribution to Program Qualifications
NoProgram QualificationContribution Level
12345
1
Gains up-to-date scientific knowledge and skills in the field of microbiology and follows the innovations in this field.
2
Plans and statistically assesses scientific research, prepares an article for publication in a refereed journal and/or presents it in a scientific meeting.
3
Uses microbiology laboratories in accordance with good laboratory practices and biosafety rules.
4
Cognizant of the importance of interdisciplinary studies and follows the disciplines related to the field.
5
Develops ability to use of devices and tools that serve routine and research purposes in the basic microbiology laboratory and applies a research in the laboratory.
6
Knows how to use scientific resources in the library and/or on the internet to reach scientific information.
7
Develops the ability to present scientific study results or a topic in the field at a professional level.
8
Develops critical and analytical thinking skills by using theoretical knowledge, the ability to listen carefully and ask the right questions.
9
Defines a scientific or technical problem under supervision or rather independently, develops a plan of action to address the problem.
10
Monitors the current, national and international professional literature in the field of microbiology, presents topic of interest as a seminar or publishes the rsults in a journal.
11
Appreciates and internalizes the social, scientific, cultural and ethical values ​​in the stages of collecting, interpreting, applying and announcing data related to the field of microbiology.

Assessment Methods

Contribution LevelAbsolute Evaluation
Rate of Midterm Exam to Success 50
Rate of Final Exam to Success 50
Total 100
ECTS / Workload Table
ActivitiesNumber ofDuration(Hour)Total Workload(Hour)
Course Hours14342
Guided Problem Solving6318
Resolution of Homework Problems and Submission as a Report14570
Term Project000
Presentation of Project / Seminar000
Quiz000
Midterm Exam12020
General Exam12020
Performance Task, Maintenance Plan000
Total Workload(Hour)170
Dersin AKTS Kredisi = Toplam İş Yükü (Saat)/30*=(170/30)6
ECTS of the course: 30 hours of work is counted as 1 ECTS credit.

Detail Informations of the Course

Course Description

CourseCodeSemesterT+P (Hour)CreditECTS
LABORATORY ROTATION II-Fall Semester0+0-6
Course Program
Prerequisites Courses
Recommended Elective Courses
Language of CourseTurkish
Course LevelSecond Cycle (Master's Degree)
Course TypeElective
Course CoordinatorProf.Dr. Esra ÇAĞAVİ
Name of Lecturer(s)Prof.Dr. Lütfü HANOĞLU, Prof.Dr. Gürkan ÖZTÜRK, Prof.Dr. Esra ÇAĞAVİ
Assistant(s)Course Supervisor: Prof. Dr Esra Çağavi, Course LaboAssistants: Laboratory supervisor from Research Institute for Health Sciences and Technologies (SABITA),
AimThe aim of the Laboratory Rotation-II course is for Master’s level students to observe and be able to explain the basic technical approaches in laboratory application that will benefit their thesis work and understanding of the scope of different laboratory disciplines. By rotating in different labs every week, students are aimed to be exposed to the basic molecular biology techniques, proteomics and genomics applications, FACS, primary and cell line culture applications, transgenic animal models, electrophysiology, neuroscience and cancer research applications, basic protein and gene expression analysis.
Course ContentThis course contains; Electroencephalography (EEG) and its use in scientific research,Electroencephalography (EEG) application and practice,Flourescence activated cell sorting (FACS) method,Functional Neurology Applications,Primary cells and cell line culture applications,Experimental and transgenic animal models and applications
,Evaluation of Laboratory Notebooks for the Midterm Exam,Drug screening and cell survival tests,Electrophysiology and patch-clamp method,Gene expression Analysis in Molecular Biology,Cancer Biology Lab and Applicaitons,Histology and cryosectioning technique,Protein Analysis in Molecular Biology,Evaluation of Laboratory Notebooks for the Final Exam.
Dersin Öğrenme KazanımlarıTeaching MethodsAssessment Methods
Explains the culture methods for differen cell type, experimental transgenic animal models, basic neuroscience application as EEG and electrophsiology, basic approaches in cancer, cell survival analysis, FACS and tissue sectioning practices. 14, 17, 3, 9A, E
Explain principles of different experimental techniques.14, 17, 9A, E
Define the principles of basic research laboratory equipments.14, 17, 9A, E
Explains how to process and interpret scientific data at the basic level.14, 17, 9A, E
Teaching Methods:14: Self Study Method, 17: Experimental Technique, 3: Problem Baded Learning Model, 9: Lecture Method
Assessment Methods:A: Traditional Written Exam, E: Homework

Course Outline

OrderSubjectsPreliminary Work
1Electroencephalography (EEG) and its use in scientific researchSelf-study
2Electroencephalography (EEG) application and practiceSelf-study
3Flourescence activated cell sorting (FACS) methodSelf-study
4Functional Neurology ApplicationsSelf-study
5Primary cells and cell line culture applicationsSelf-study
6Experimental and transgenic animal models and applications
7Evaluation of Laboratory Notebooks for the Midterm Exam
8Drug screening and cell survival tests
9Electrophysiology and patch-clamp method
10Gene expression Analysis in Molecular Biology
11Cancer Biology Lab and Applicaitons
12Histology and cryosectioning technique
13Protein Analysis in Molecular Biology
14Evaluation of Laboratory Notebooks for the Final Exam
Resources
1. Laboratory Biosafety Manual (Third edition) 1.Containment of biohazards - methods 2. Manuals I.Title. ISBN 92 4 154650 6 (LC/NLM classification: QY 25) WHO/CDS/CSR/LYO/2004.11
Internet database

Course Contribution to Program Qualifications

Course Contribution to Program Qualifications
NoProgram QualificationContribution Level
12345
1
Gains up-to-date scientific knowledge and skills in the field of microbiology and follows the innovations in this field.
2
Plans and statistically assesses scientific research, prepares an article for publication in a refereed journal and/or presents it in a scientific meeting.
3
Uses microbiology laboratories in accordance with good laboratory practices and biosafety rules.
4
Cognizant of the importance of interdisciplinary studies and follows the disciplines related to the field.
5
Develops ability to use of devices and tools that serve routine and research purposes in the basic microbiology laboratory and applies a research in the laboratory.
6
Knows how to use scientific resources in the library and/or on the internet to reach scientific information.
7
Develops the ability to present scientific study results or a topic in the field at a professional level.
8
Develops critical and analytical thinking skills by using theoretical knowledge, the ability to listen carefully and ask the right questions.
9
Defines a scientific or technical problem under supervision or rather independently, develops a plan of action to address the problem.
10
Monitors the current, national and international professional literature in the field of microbiology, presents topic of interest as a seminar or publishes the rsults in a journal.
11
Appreciates and internalizes the social, scientific, cultural and ethical values ​​in the stages of collecting, interpreting, applying and announcing data related to the field of microbiology.

Assessment Methods

Contribution LevelAbsolute Evaluation
Rate of Midterm Exam to Success 50
Rate of Final Exam to Success 50
Total 100

Numerical Data

Ekleme Tarihi: 26/11/2023 - 17:21Son Güncelleme Tarihi: 26/11/2023 - 17:21