Optical microscope structure, usage areas, Electron microscope working principle, types (SEM, TEM), usage areas, Laser Confocal microscope working principle, Scanning Probe Microscopy Techniques (STM, AFM, SHPM, etc.) working principles, usage areas as nano device, Sample preparation techniques for each microscope technique and their advantages and disadvantages, capabilities and limitations will be introduced, and basic information will be given.
Course Content
This course contains; Basic Working Principles of Optical Microscope,Usage Areas of Optical Microscope,Fluorescent Microscopy and its uses,Basic Working Principles of Laser Confocal Microscope,Advantages of Laser Confocal Microscope,Basic Working Principles of Electron Microscope,Midterm,Types of Electron Microscope,Usage Areas of Electron Microscope and Sample Preparation,Scanning Probe Microscopy Techniques and Basic Principles,Types of Scanning Probe Microscopy,Use of Scanning Probe Microscopes as Nano Devices,Sample Preparation Techniques, Special Application Areas,Final exam.
Dersin Öğrenme Kazanımları
Teaching Methods
Assessment Methods
Defines the basic concepts of microscopic imaging.
14, 9
A
Explains the concept of optical microscope and microscopic imaging.
14, 9
A, E
Explains the optical principles of basic equipment.
14, 9
A
Explains advanced and emerging new microscopic techniques.
14, 9
A, E
Defines the basic circuits and parts of advanced microscopes.
14, 9
A, E
Analyzes advanced techniques.
14, 9
A
Explains sample preparation techniques.
14, 9
A, E
Teaching Methods:
14: Self Study Method, 9: Lecture Method
Assessment Methods:
A: Traditional Written Exam, E: Homework
Course Outline
Order
Subjects
Preliminary Work
1
Basic Working Principles of Optical Microscope
Reading the relevant course presentation
2
Usage Areas of Optical Microscope
Reading the relevant course presentation
3
Fluorescent Microscopy and its uses
Reading the relevant course presentation
4
Basic Working Principles of Laser Confocal Microscope
Reading the relevant course presentation
5
Advantages of Laser Confocal Microscope
Reading the relevant course presentation
6
Basic Working Principles of Electron Microscope
Reading the relevant course presentation
7
Midterm
8
Types of Electron Microscope
Reading the relevant course presentation
9
Usage Areas of Electron Microscope and Sample Preparation
Reading the relevant course presentation
10
Scanning Probe Microscopy Techniques and Basic Principles
Reading the relevant course presentation
11
Types of Scanning Probe Microscopy
Reading the relevant course presentation
12
Use of Scanning Probe Microscopes as Nano Devices
Reading the relevant course presentation
13
Sample Preparation Techniques, Special Application Areas
Reading the relevant course presentation
14
Final exam
Resources
(1) Fundamentals of Light Microscopy and Electronic Imaging, Douglas B. Murphy, Wiley-Liss, 2001.
(2) Stephen W. Paddock, Confocal Microscopy Methods and Protocols, Humana, P.J. Goodhew, Electron Microscopy and Analysis, Taylor & Francis, 2001.
Lecture notes
Course Contribution to Program Qualifications
Course Contribution to Program Qualifications
No
Program Qualification
Contribution Level
1
2
3
4
5
1
Know about histology of basic tissue, basic embryological development, mechanisms of routine micro-preparation techniques, and the basics of active use of a microscope
2
Have knowledge of ethics of research and the rules of documenting a research
X
3
Can relay information about basic histology-embryology
4
Can work on tissue preservation, tissue dye and do microscopic examination.
X
5
Can do literature review
X
6
Can attend both clinical and nonclinical studies and make proposals for methods.
X
7
Can document outcomes.
X
8
Express themselves by using resources in Histology-Embryology and in the areas of histotechnical science, and communication techniques.
X
9
Improve their critical thinking, and can create strategies.
X
10
Behave with an ethical concern in both clinical and nonclinical preparation.
X
11
Have the awareness of business ethics and create a secure working environment, evaluate the contributors.
12
Exhibit scientific assets in national or international scientific meetings using foreign languages besides their mother language.
13
Promote interdisciplinary cooperation with the consciousness of social responsibility and remain true to professional secrecy, create final decleration within the framework of the quality.
Assessment Methods
Contribution Level
Absolute Evaluation
Rate of Midterm Exam to Success
50
Rate of Final Exam to Success
50
Total
100
ECTS / Workload Table
Activities
Number of
Duration(Hour)
Total Workload(Hour)
Course Hours
14
4
56
Guided Problem Solving
2
2
4
Resolution of Homework Problems and Submission as a Report
4
5
20
Term Project
0
0
0
Presentation of Project / Seminar
0
0
0
Quiz
0
0
0
Midterm Exam
1
10
10
General Exam
1
15
15
Performance Task, Maintenance Plan
0
0
0
Total Workload(Hour)
105
Dersin AKTS Kredisi = Toplam İş Yükü (Saat)/30*=(105/30)
4
ECTS of the course: 30 hours of work is counted as 1 ECTS credit.
Optical microscope structure, usage areas, Electron microscope working principle, types (SEM, TEM), usage areas, Laser Confocal microscope working principle, Scanning Probe Microscopy Techniques (STM, AFM, SHPM, etc.) working principles, usage areas as nano device, Sample preparation techniques for each microscope technique and their advantages and disadvantages, capabilities and limitations will be introduced, and basic information will be given.
Course Content
This course contains; Basic Working Principles of Optical Microscope,Usage Areas of Optical Microscope,Fluorescent Microscopy and its uses,Basic Working Principles of Laser Confocal Microscope,Advantages of Laser Confocal Microscope,Basic Working Principles of Electron Microscope,Midterm,Types of Electron Microscope,Usage Areas of Electron Microscope and Sample Preparation,Scanning Probe Microscopy Techniques and Basic Principles,Types of Scanning Probe Microscopy,Use of Scanning Probe Microscopes as Nano Devices,Sample Preparation Techniques, Special Application Areas,Final exam.
Dersin Öğrenme Kazanımları
Teaching Methods
Assessment Methods
Defines the basic concepts of microscopic imaging.
14, 9
A
Explains the concept of optical microscope and microscopic imaging.
14, 9
A, E
Explains the optical principles of basic equipment.
14, 9
A
Explains advanced and emerging new microscopic techniques.
14, 9
A, E
Defines the basic circuits and parts of advanced microscopes.
14, 9
A, E
Analyzes advanced techniques.
14, 9
A
Explains sample preparation techniques.
14, 9
A, E
Teaching Methods:
14: Self Study Method, 9: Lecture Method
Assessment Methods:
A: Traditional Written Exam, E: Homework
Course Outline
Order
Subjects
Preliminary Work
1
Basic Working Principles of Optical Microscope
Reading the relevant course presentation
2
Usage Areas of Optical Microscope
Reading the relevant course presentation
3
Fluorescent Microscopy and its uses
Reading the relevant course presentation
4
Basic Working Principles of Laser Confocal Microscope
Reading the relevant course presentation
5
Advantages of Laser Confocal Microscope
Reading the relevant course presentation
6
Basic Working Principles of Electron Microscope
Reading the relevant course presentation
7
Midterm
8
Types of Electron Microscope
Reading the relevant course presentation
9
Usage Areas of Electron Microscope and Sample Preparation
Reading the relevant course presentation
10
Scanning Probe Microscopy Techniques and Basic Principles
Reading the relevant course presentation
11
Types of Scanning Probe Microscopy
Reading the relevant course presentation
12
Use of Scanning Probe Microscopes as Nano Devices
Reading the relevant course presentation
13
Sample Preparation Techniques, Special Application Areas
Reading the relevant course presentation
14
Final exam
Resources
(1) Fundamentals of Light Microscopy and Electronic Imaging, Douglas B. Murphy, Wiley-Liss, 2001.
(2) Stephen W. Paddock, Confocal Microscopy Methods and Protocols, Humana, P.J. Goodhew, Electron Microscopy and Analysis, Taylor & Francis, 2001.
Lecture notes
Course Contribution to Program Qualifications
Course Contribution to Program Qualifications
No
Program Qualification
Contribution Level
1
2
3
4
5
1
Know about histology of basic tissue, basic embryological development, mechanisms of routine micro-preparation techniques, and the basics of active use of a microscope
2
Have knowledge of ethics of research and the rules of documenting a research
X
3
Can relay information about basic histology-embryology
4
Can work on tissue preservation, tissue dye and do microscopic examination.
X
5
Can do literature review
X
6
Can attend both clinical and nonclinical studies and make proposals for methods.
X
7
Can document outcomes.
X
8
Express themselves by using resources in Histology-Embryology and in the areas of histotechnical science, and communication techniques.
X
9
Improve their critical thinking, and can create strategies.
X
10
Behave with an ethical concern in both clinical and nonclinical preparation.
X
11
Have the awareness of business ethics and create a secure working environment, evaluate the contributors.
12
Exhibit scientific assets in national or international scientific meetings using foreign languages besides their mother language.
13
Promote interdisciplinary cooperation with the consciousness of social responsibility and remain true to professional secrecy, create final decleration within the framework of the quality.
