Course Description
| Course | Code | Semester | T+P (Hour) | Credit | ECTS |
|---|---|---|---|---|---|
| ADVANCED MICROBIOLOGY LABORATORY ROTATION-II | - | Spring Semester | 0+8 | 4 | 15 |
| Course Program |
| Prerequisites Courses | |
| Recommended Elective Courses |
| Language of Course | Turkish |
| Course Level | Third Cycle (Doctorate Degree) |
| Course Type | Required |
| Course Coordinator | Assist.Prof. Özlem GÜVEN |
| Name of Lecturer(s) | Assoc.Prof. Ayşe İSTANBULLU TOSUN, Assist.Prof. Özlem GÜVEN |
| Assistant(s) | |
| Aim | Identification of fungi, parasites and viruses, explanation of laboratory methods used and application of techniques |
| Course Content | This course contains; Working principles, clinical samples and techniques used in the mycology laboratory,Methods used in the identification of dermatophytes - I,Methods used in the identification of dermatophytes - II,Methods used in the identification of invasive fungi and current research topics,Antifungal sensitivity tests and interpretation,Working principles, clinical samples and techniques used in the parasitology laboratory,Methods used in the identification of intestinal parasites and current research topics,Methods used in the identification of genitourinary parasites and current research topics,Methods used in the identification of blood and tissue parasites and current research topics,Immunology and molecular biology methods used in mycology and parasitology laboratories,Working principles, clinical samples and techniques used in the virology laboratory,Virus culture techniques and culture-based tests,Immunology methods used in virology (rapid serological tests, DFA, IFA, ELISA, WB, etc.) and interpretation of the results,Molecular biology methods used in virology (PCR, qPCR, RT-qPCR, LAMP assay, sequencing, mutation detection, etc.) and interpretation of the results; Tests to detect antiviral resistance,Current diagnostic methods in virology. |
| Dersin Öğrenme Kazanımları | Teaching Methods | Assessment Methods |
| Explains and applies the methods used in the detection and identification of fungi. | 10, 16, 17, 9 | A, H |
| Parazitlerin saptanmasında ve tanımlanmasında kullanılan yöntemleri açıklar ve uygular. | 10, 16, 17, 9 | A, H |
| Explains and applies the methods used in the detection and identification of viruses. | 10, 16, 17, 9 | A |
| Explains and applies the methods used in detecting antimicrobial resistance. | 10, 16, 17, 9 | A, H |
| Teaching Methods: | 10: Discussion Method, 16: Question - Answer Technique, 17: Experimental Technique, 9: Lecture Method |
| Assessment Methods: | A: Traditional Written Exam, H: Performance Task |
Course Outline
| Order | Subjects | Preliminary Work |
|---|---|---|
| 1 | Working principles, clinical samples and techniques used in the mycology laboratory | |
| 2 | Methods used in the identification of dermatophytes - I | |
| 3 | Methods used in the identification of dermatophytes - II | |
| 4 | Methods used in the identification of invasive fungi and current research topics | |
| 4 | Antifungal sensitivity tests and interpretation | |
| 5 | Working principles, clinical samples and techniques used in the parasitology laboratory | |
| 6 | Methods used in the identification of intestinal parasites and current research topics | |
| 7 | Methods used in the identification of genitourinary parasites and current research topics | |
| 8 | Methods used in the identification of blood and tissue parasites and current research topics | |
| 9 | Immunology and molecular biology methods used in mycology and parasitology laboratories | |
| 10 | Working principles, clinical samples and techniques used in the virology laboratory | |
| 11 | Virus culture techniques and culture-based tests | |
| 12 | Immunology methods used in virology (rapid serological tests, DFA, IFA, ELISA, WB, etc.) and interpretation of the results | |
| 13 | Molecular biology methods used in virology (PCR, qPCR, RT-qPCR, LAMP assay, sequencing, mutation detection, etc.) and interpretation of the results; Tests to detect antiviral resistance | |
| 14 | Current diagnostic methods in virology |
| Resources |
| Koneman's Color Atlas And Textbook of Diagnostic Microbiology. 7th edt. Jones & Bartlett Learning; 2016. |
Course Contribution to Program Qualifications
| Course Contribution to Program Qualifications | |||||||
| No | Program Qualification | Contribution Level | |||||
| 1 | 2 | 3 | 4 | 5 | |||
| 1 | Plans and statistically assesses scientific research, prepares an article for publication in a refereed journal and presents it in a scientific meeting. | X | |||||
| 2 | Knows laboratory methods used in the field of Medical Microbiology and designs experimental studies on microorganisms. | X | |||||
| 3 | Gains up-to-date scientific knowledge and skills in the field of microbiology and follows the innovations in this field. | X | |||||
| 4 | Develops ability to use of devices and tools that serve routine analyses and research purposes in the medical microbiology laboratory | X | |||||
| 5 | Statistically analyzes results of experiments at the expert level, (re)evaluates and convincingly defends, if necessary, and presents the results of scientific studies at the in writing or orally. | ||||||
| 6 | Develops ability to write grant proposals | X | |||||
| 7 | Solves a scientific and technical problem. | X | |||||
| 8 | Participates in meetings related to the field of Medical Microbiology, presents papers, participates in discussions, talks before audiance | X | |||||
| 9 | Understands and interprets microbial diseases and their etiology at expert level. | X | |||||
Assessment Methods
| Contribution Level | Absolute Evaluation | |
| Rate of Midterm Exam to Success | 50 | |
| Rate of Final Exam to Success | 50 | |
| Total | 100 | |
| ECTS / Workload Table | ||||||
| Activities | Number of | Duration(Hour) | Total Workload(Hour) | |||
| Course Hours | 14 | 8 | 112 | |||
| Guided Problem Solving | 14 | 5 | 70 | |||
| Resolution of Homework Problems and Submission as a Report | 0 | 0 | 0 | |||
| Term Project | 9 | 8 | 72 | |||
| Presentation of Project / Seminar | 0 | 0 | 0 | |||
| Quiz | 0 | 0 | 0 | |||
| Midterm Exam | 1 | 40 | 40 | |||
| General Exam | 1 | 70 | 70 | |||
| Performance Task, Maintenance Plan | 14 | 6 | 84 | |||
| Total Workload(Hour) | 448 | |||||
| Dersin AKTS Kredisi = Toplam İş Yükü (Saat)/30*=(448/30) | 15 | |||||
| ECTS of the course: 30 hours of work is counted as 1 ECTS credit. | ||||||
Detail Informations of the Course
Course Description
| Course | Code | Semester | T+P (Hour) | Credit | ECTS |
|---|---|---|---|---|---|
| ADVANCED MICROBIOLOGY LABORATORY ROTATION-II | - | Spring Semester | 0+8 | 4 | 15 |
| Course Program |
| Prerequisites Courses | |
| Recommended Elective Courses |
| Language of Course | Turkish |
| Course Level | Third Cycle (Doctorate Degree) |
| Course Type | Required |
| Course Coordinator | Assist.Prof. Özlem GÜVEN |
| Name of Lecturer(s) | Assoc.Prof. Ayşe İSTANBULLU TOSUN, Assist.Prof. Özlem GÜVEN |
| Assistant(s) | |
| Aim | Identification of fungi, parasites and viruses, explanation of laboratory methods used and application of techniques |
| Course Content | This course contains; Working principles, clinical samples and techniques used in the mycology laboratory,Methods used in the identification of dermatophytes - I,Methods used in the identification of dermatophytes - II,Methods used in the identification of invasive fungi and current research topics,Antifungal sensitivity tests and interpretation,Working principles, clinical samples and techniques used in the parasitology laboratory,Methods used in the identification of intestinal parasites and current research topics,Methods used in the identification of genitourinary parasites and current research topics,Methods used in the identification of blood and tissue parasites and current research topics,Immunology and molecular biology methods used in mycology and parasitology laboratories,Working principles, clinical samples and techniques used in the virology laboratory,Virus culture techniques and culture-based tests,Immunology methods used in virology (rapid serological tests, DFA, IFA, ELISA, WB, etc.) and interpretation of the results,Molecular biology methods used in virology (PCR, qPCR, RT-qPCR, LAMP assay, sequencing, mutation detection, etc.) and interpretation of the results; Tests to detect antiviral resistance,Current diagnostic methods in virology. |
| Dersin Öğrenme Kazanımları | Teaching Methods | Assessment Methods |
| Explains and applies the methods used in the detection and identification of fungi. | 10, 16, 17, 9 | A, H |
| Parazitlerin saptanmasında ve tanımlanmasında kullanılan yöntemleri açıklar ve uygular. | 10, 16, 17, 9 | A, H |
| Explains and applies the methods used in the detection and identification of viruses. | 10, 16, 17, 9 | A |
| Explains and applies the methods used in detecting antimicrobial resistance. | 10, 16, 17, 9 | A, H |
| Teaching Methods: | 10: Discussion Method, 16: Question - Answer Technique, 17: Experimental Technique, 9: Lecture Method |
| Assessment Methods: | A: Traditional Written Exam, H: Performance Task |
Course Outline
| Order | Subjects | Preliminary Work |
|---|---|---|
| 1 | Working principles, clinical samples and techniques used in the mycology laboratory | |
| 2 | Methods used in the identification of dermatophytes - I | |
| 3 | Methods used in the identification of dermatophytes - II | |
| 4 | Methods used in the identification of invasive fungi and current research topics | |
| 4 | Antifungal sensitivity tests and interpretation | |
| 5 | Working principles, clinical samples and techniques used in the parasitology laboratory | |
| 6 | Methods used in the identification of intestinal parasites and current research topics | |
| 7 | Methods used in the identification of genitourinary parasites and current research topics | |
| 8 | Methods used in the identification of blood and tissue parasites and current research topics | |
| 9 | Immunology and molecular biology methods used in mycology and parasitology laboratories | |
| 10 | Working principles, clinical samples and techniques used in the virology laboratory | |
| 11 | Virus culture techniques and culture-based tests | |
| 12 | Immunology methods used in virology (rapid serological tests, DFA, IFA, ELISA, WB, etc.) and interpretation of the results | |
| 13 | Molecular biology methods used in virology (PCR, qPCR, RT-qPCR, LAMP assay, sequencing, mutation detection, etc.) and interpretation of the results; Tests to detect antiviral resistance | |
| 14 | Current diagnostic methods in virology |
| Resources |
| Koneman's Color Atlas And Textbook of Diagnostic Microbiology. 7th edt. Jones & Bartlett Learning; 2016. |
Course Contribution to Program Qualifications
| Course Contribution to Program Qualifications | |||||||
| No | Program Qualification | Contribution Level | |||||
| 1 | 2 | 3 | 4 | 5 | |||
| 1 | Plans and statistically assesses scientific research, prepares an article for publication in a refereed journal and presents it in a scientific meeting. | X | |||||
| 2 | Knows laboratory methods used in the field of Medical Microbiology and designs experimental studies on microorganisms. | X | |||||
| 3 | Gains up-to-date scientific knowledge and skills in the field of microbiology and follows the innovations in this field. | X | |||||
| 4 | Develops ability to use of devices and tools that serve routine analyses and research purposes in the medical microbiology laboratory | X | |||||
| 5 | Statistically analyzes results of experiments at the expert level, (re)evaluates and convincingly defends, if necessary, and presents the results of scientific studies at the in writing or orally. | ||||||
| 6 | Develops ability to write grant proposals | X | |||||
| 7 | Solves a scientific and technical problem. | X | |||||
| 8 | Participates in meetings related to the field of Medical Microbiology, presents papers, participates in discussions, talks before audiance | X | |||||
| 9 | Understands and interprets microbial diseases and their etiology at expert level. | X | |||||
Assessment Methods
| Contribution Level | Absolute Evaluation | |
| Rate of Midterm Exam to Success | 50 | |
| Rate of Final Exam to Success | 50 | |
| Total | 100 | |